查看“︁MorphoJ”︁的源代码


==新建==
<code>File</code> &gt; <code>Create New Project</code>

<code>File type</code> 选择 <code>TPS</code> &gt; <code>Create Dataset</code> 

== 准备 ==
选择 <code>Project Tree</code> 文件夹中的<code>Dataset</code>

<code>Preliminaries</code> &gt; <code>New Procrustes Fit</code> &gt; <code>Align by principal axes</code> &gt; <code>Perform Procrustes Fit</code>

<code>Preliminaries</code> &gt; <code>Generate Covariance Matrix ..</code> &gt; <code>Execute</code>

<code>Preliminaries</code> &gt; <code>Extract New CLassfier From ID String</code> 其中 <code>First character</code> <code>Last character</code> 填写数字，<code>Name for new  classifier</code> 填写对应的字母 <code>Execute</code>
==PCA==
<code>Variation</code> &gt; <code>Principal Component Analysis</code>

<code>Graphics</code> &gt; <code>PCA</code> &gt; <code>PC scores</code> 右键调整颜色等信息 常用的有 改变散点大小 <code>Resize Data Points</code>，改变散点颜色 <code>Color the Data Points</code>，置信区间 <code>Confidence Ellipses</code>，输出图片<code>Export Graph to File</code>

<code>Results</code> 查看 <code>Principal Component Analysis: PCA: CovMatrix, newDataset, Procrustes coordinates</code>，<code>Cumulative</code> 一栏到第二个，就显示 PC1 和 PC2 总 cover 多少
==CVA==
<code>Comparision</code> &gt; <code>Canonical Variate Analysis</code> &gt; <code>Classifier variable(s) to use coordinates</code> 选择一个 &gt; <code>Execute</code>

<code>Graphics</code> &gt; <code>CVA</code> &gt; <code>CV scores</code>

<code>Results</code> 查看 <code>Variation among groups, scaled by the inverse of the within-group variation</code> 同样看 <code>Cumulative</code>
[[分类:Bioinformatics]]